Featured 

Biological Ontology

Software
Protege
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58
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Stanford Center for Biomedical Informatics Research
Protégé is a free, open-source platform that provides a growing user community...
...based applications with ontologies. At it ...and manipulation of ontologies in various representation...
OBO-Edit
free
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4
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John Day Ricther
OBO-Edit is an open source ontology editor written in Java. OBO-Edit features an easy to use editing...
...an open source ontology editor written ...writing ontologies in the OBO biological ontology file...
OLS Dialog
free
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4
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Proteomics Developers
OLS Dialog is a Java front end to the Ontology Lookup Service allowing easy access...
...end to the Ontology Lookup Service allowing ...extensive list of biomedical ontologies. OLS Dialog is a...
Genotech
free
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4
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Ahmad Jamil
Genotech is an open source scientific software developed in JAVA for modeling complex...
...JAVA for modeling complex biological regulatory networks. Main features...
GO-Elite
free
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4
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Alexander C. Zambon
GO-Elite is designed to identify a minimal non-redundant set of biological Ontology terms or pathways to describe...
...set of biological Ontology terms or ...Default resources include multiple ontologies (Gene, Disease...
SBML Harvester
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4
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BioSimConnector Team
The SBML Harvester creates a complex ontology-based representation of SBML models, utilizing both the structure...
...Harvester creates a complex ontology-based representation of SBML ...models and biomedical ontologies.
Online Spectra Viewer
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4
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Max Ulbrich
Online Spectra Viewer is a little program that makes it easy to view and compare...
...proteins and dyes for biological applications. It allows you...
MemoFinder
free
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1
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Bartek Wilczynski and Milosz Darzynkiewicz
MeMoFinder is a software helping researchers in the task of finding motifs in biological sequences using a consensus...
...of finding motifs in biological sequences using a consensus approach...
dnaTools Xplorer
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1
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dnaTools, Inc.
dnaTools Xplorer provides you a simple interface for analyzing complex biological...
...interface for analyzing complex biological data such as genetic...
Vogon
free
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1
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jdamerow
Vogon is a Ontology-based text annotation tool for creating relations between terms in a text...
Vogon is a Ontology-based text annotation ...as RDF triples. Ontology is the philosophical study...
Cytosketch
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1
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Cytocode Ltd.
Cytosketch is specially designed for processing, organizing and publishing biological images...
...processing, organizing and publishing biological images. It provides tools...
Gene Ontology
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Gene Ontology Team
Bibliosphere Analysis Kit
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Genomatix Software
BiblioSphere offers a unique combination of literature-mining and pathway analysis for molecular biologists...
...biological networks in different biological contexts. Use BiblioSphere to extend biological...