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Phylogenetic

Software
FigTree
free rating
51
Andrew Rambaut
FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing...
as a graphical viewer of phylogenetic trees and as a program
Seaview
free rating
30
Manolo Gouy
SeaView is a multiplatform, graphical user interface for multiple sequence alignment...
sequences and of phylogenetic trees...files. SeaView computes phylogenetic trees by *
MEGA 5
free rating
18
Koikiro Temura,Daniel Peterson,Glen Stetcher
MEGA is an integrated tool for conducting automatic and manual alignment...
alignment, inferring phylogenetic trees, mining...alignments, inferred phylogenetic trees
Mesquite
rating
16
Wayne and David Maddison
Mesquite is software for evolutionary biology, designed to help biologists analyze comparative...
emphasis is on phylogenetic analysis ...others do non-phylogenetic multivariate analysis. Because
DensiTree
free rating
16
Remco Bouckaert
DensiTree is a program for qualitative analysis of sets of trees. Bayesian hierarchical clustering...
provide a powerful tool for phylogenetic analysis, linguistic research
njplot
free rating
11
M. Gouy
NJplot is a tree drawing program able to draw any phylogenetic tree expressed in the Newick...
to draw any phylogenetic tree expressed...the Newick phylogenetic tree format (e.g
unrooted
free rating
10
Pôle Bioinformatique Lyonnais
Unrooted is a tree drawing program able to draw any binary tree expressed...
expressed in the standard phylogenetic tree format (e.g
Epos
rating
6
University of Jena
EPoS is a modular software framework for phylogenetic analysis and visualization. Existing phylogenetic...
framework for phylogenetic analysis and visualization. Existing phylogenetic software can
SplitsTree
free rating
5
Universität Tübingen
SplitsTree is the leading application for computing unrooted phylogenetic networks...
for computing unrooted phylogenetic networks...will compute a phylogenetic tree or network
TreeView X
free rating
4
Rod Page
TreeView X is an open source program to display phylogenetic trees on Linux, Unix, Mac OS X, and Windows platforms...
source program to display phylogenetic trees on Linux, Unix
MacClade
free rating
4
David R. Maddison and Wayne P. Maddison
MacClade is a computer program for phylogenetic...
is a computer program for phylogenetic
PhyloCoco
free rating
3
Daniele Catanzaro
PhyloCoco is a simple tool for molecular phylogenetic estimation. PhyloCoco is a simple...
tool for molecular phylogenetic estimation. PhyloCoco...algorithm for phylogenetic
Seqotron
free rating
3
Mathieu Fourment
Seqotron is a user-friendly sequence editor for your Mac. The program is written in Objective-C/Cocoa...
and MAFFT. It provides a phylogenetic tree inference with Physher
Garli
free rating
2
Derrick J. Zwickl
GARLI performs heuristic phylogenetic searches under the General Time Reversible (GTR)...
GARLI performs heuristic phylogenetic searches under the General
SplitsTree4
free rating
1
Universität Tübingen
SplitsTree4 is an application for computing unrooted phylogenetic networks from molecular sequence...
for computing unrooted phylogenetic networks...will compute a phylogenetic tree or network
phylogenetic
rating
1
Apple Inc.
Mesquite OSX
free rating
1
Wayne P. Maddison & David R. Maddison
Mesquite is software for evolutionary biology, designed to help biologists analyze...
emphasis is on phylogenetic analysis ...others do non-phylogenetic multivariate analysis. Because
POY

POY

free rating
1
American Museum of Natural History
POY is a phylogenetic analysis program that supports multiple kinds of data (e.g...
POY is a phylogenetic analysis program that supports
SATe
free rating
1
Jiaye Yu, Mark Holder, Jeet Sukumaran, Siavash Mirarab, and Jamie Oaks
SATé is a software package for inferring a sequence alignment and phylogenetic tree. The iterative algorithm...
inferring a sequence alignment and phylogenetic tree. The iterative algorithm
TreeSnatcher Plus
free rating
1
Thomas Laubach
TreeSnatcher Plus is a GUI-driven Java application that automates the generation...
readable representation of multifurcating phylogenetic trees contained in pixel

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