Featured

Structure Alignment

Software

Relevance Popularity Rating

MegAlign

450

DNASTAR

Lasergene’s MegAlign offers both DNA and protein sequence alignment using a range of pairwise and multiple alignment...

alignment...alignment, as well as analyze phylogeny, differences in chemical, structural

Jalview

free

University of Dundee

Jalview is a multiple alignment editor written in Java. It is used widely in a variety of web pages...

is a multiple alignment...as a general purpose alignment editor. Jalview Development

clustalx

free

embl

ClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins...

Alignment (MSA) is generally the alignment...purpose multiple sequence alignment program

Cn3D

free

NCBI

Cn3D is a helper application for your web browser that allows you to view 3...

view 3-dimensional structures from NCBI's...displays structure, sequence, and alignment

MEGA 5

free

Koikiro Temura,Daniel Peterson,Glen Stetcher

MEGA is an integrated tool for conducting automatic and manual alignment...

and manual alignment, inferring phylogenetic...data, sequence alignments, inferred phylogenetic

Models!

Wowsystems Informática Lda.

MODELS! (UML editor) **Special launch price with free upgrades...

notes, grids and alignment tools, coloring...structure diagrams - Postit notes, grids, alignment

AliView

free

Anders Larsson

AliView is a free alignment viewer and editor for Mac. Main features: - define aligner program presets (different parameters...

features: - define aligner program presets...different software). align new sequences

VocALign Project

Synchro Arts

VocALign Project is an affordable audio alignment for music and post-production. It supports Pro...

is an affordable audio alignment for music and post

LigandScout

free

Inte:Ligand

LigandScout is a fully integrated platform for accurate virtual screening based on 3D chemical feature pharmacophore...

structure based pharmacophore modeling, and includes novel high performance alignment

MAFFT

free

Kazutaka Katoh

MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple...

multiple sequence alignment program for unix...alignment methods, L-INS-i (accurate; for alignment

ColliderScribe

Astute Graphics Limited

Additionaly be inspired by the Space Fill panel which allows you to fill single or multiple...

COLLIDERSCRIBE allows you to align shapes with speed...Made up of three alignment tools that use clear

inGAP

free

inGAP Team

inGAP-sv is a structural variation detection and visualization app. The tool can refine short...

short-read alignment by re-aligning...detect large-size structural variations using paired

GLoQ-Net

free

Nicola Ferraro

GLoQNet is a framework for the alignment of protein to protein interaction (PPI) networks. It performs global...

It performs global alignment, local alignment, and network...Global-Local Alignment and Querying

Modeller

free

Andrej Sali

MODELLER is used for homology or comparative modeling of protein three...

three-dimensional structures. The user provides an alignment of a sequence

Structure visuelle

IdeasOnCanvas GmbH

HTML5 Structure and Semantics

com.trainsimple

prankster

free

Ari Loytynoja

PRANKSTER is a graphical front-end to the multiple sequence alignment program PRANK. It supports the input and output...

the multiple sequence alignment program PRANK...of multiple different alignment formats, printing

SATe

free

Jiaye Yu, Mark Holder, Jeet Sukumaran, Siavash Mirarab, and Jamie Oaks

SATé is a software package for inferring a sequence alignment and phylogenetic tree. The iterative algorithm...

inferring a sequence alignment and phylogenetic...algorithm involves repeated alignment

Squint

free

The University of Auckland

Squint is an advanced alignment tool. It brings together algorithmic alignment...

brings together algorithmic alignment of molecular...Import/export sequence/alignment

Structure Standardizer

Tripod Development

Structure Alignment

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